metagenomics

an archive of posts with this tag

Mar 12, 2026 Day 1 — Laptop vs HPC: Why Bioinformatics Needs Both
Mar 11, 2026 Day 8 — From Raw Data to Paper Figures: A Complete Microbiome Stats Workflow
Mar 10, 2026 Day 7 — Correlation Analysis & Mantel Test: Linking MAGs to Environment
Mar 09, 2026 Day 6 — WGCNA for Microbiome Co-Abundance Networks: From Individual MAGs to Modules
Mar 06, 2026 Day 5 — Multiple Regression for MAG Abundance: Linking Genomics to Environment
Mar 05, 2026 Day 4 — Non-Parametric Tests for Microbiome Data: Wilcoxon, Kruskal-Wallis & Effect Sizes
Mar 04, 2026 Day 3 — PERMANOVA with adonis2: Testing Real Community Differences
Mar 03, 2026 Day 2 — Constrained Ordination: RDA & dbRDA for Microbiome Community Analysis
Mar 02, 2026 Day 1 — Why Normal Statistics Fail for Microbiome Data (And What We Use Instead)
Feb 24, 2026 Day 5: Substrate Uptake & Utilization in Size-Fractionated Estuarine Microbiomes
Feb 20, 2026 Metagenome Analysis - Graduate Course Materials
Feb 18, 2026 10-Day Metagenome Analysis Series - Complete Summary
Feb 16, 2026 Day 10: Multi-Omics Integration - Metagenomics & Metatranscriptomics
Feb 14, 2026 Day 9: Visualization & Publication - Making Data Tell Stories
Feb 13, 2026 Day 8: Workflow Wrappers & Web Platforms - Streamlining Metagenome Analysis
Feb 12, 2026 Day 7: Comparative Genomics & Statistical Analysis - Connecting Genomes to Environment
Feb 10, 2026 Day 5: Genome Annotation - Understanding Metabolic Potential
Feb 09, 2026 Day 4: Genome Dereplication & Taxonomic Classification - From MAGs to Species
Feb 06, 2026 Day 3: Genome Binning - Recovering Individual Genomes (MAGs) from Metagenomes
Feb 04, 2026 Day 2: Metagenome Assembly - Reconstructing Genomes from Short Reads
Feb 02, 2026 Day 1: Quality Control, Contamination Removal, and Read-Based Taxonomic Analysis
Jan 30, 2026 Genome-Resolved Metabolism: From Metabolic Potential to Co-Metabolism Networks
Jan 26, 2026 Building Custom HUMAnN3 Databases with Struo2 and GTDB: A Realistic Guide from the Trenches