| Jun 15, 2026 | Your Code Is a Publication: How to Make Bioinformatics Workflows Citable with Zenodo |
| Jun 12, 2026 | Free-living or Particle-attached? Classifying 2,000 Estuarine Genomes by Lifestyle from Paired Metagenomes |
| Jun 10, 2026 | Who Eats Particles and Who Lives Free? CAZyme and Transporter Analysis Across 1,824 Estuarine Genomes |
| Jun 05, 2026 | Differential Abundance Analysis for MAGs: DESeq2, ANCOM-BC, ALDEx2, and MaAsLin2 |
| Jun 04, 2026 | Who Shared What With Whom? Detecting Horizontal Gene Transfer in Estuarine Metagenomes with LocalHGT |
| Apr 30, 2026 | Building a Custom GTDBtk Database for HUMAnN3 — A Gene Catalogue Approach for Environmental Metagenomics |
| Apr 14, 2026 | Co-occurrence Networks from Genome Abundance Data — A Complete R Workflow |
| Mar 30, 2026 | Day 1 — Who Is Active, Not Just Present? An Introduction to Metatranscriptomics |
| Mar 12, 2026 | Day 1 — Laptop vs HPC: Why Bioinformatics Needs Both |
| Mar 11, 2026 | Day 8 — From Raw Data to Paper Figures: A Complete Microbiome Stats Workflow |
| Mar 10, 2026 | Day 7 — Correlation Analysis & Mantel Test: Linking MAGs to Environment |
| Mar 09, 2026 | Day 6 — WGCNA for Microbiome Co-Abundance Networks: From Individual MAGs to Modules |
| Mar 06, 2026 | Day 5 — Multiple Regression for MAG Abundance: Linking Genomics to Environment |
| Mar 05, 2026 | Day 4 — Non-Parametric Tests for Microbiome Data: Wilcoxon, Kruskal-Wallis & Effect Sizes |
| Mar 04, 2026 | Day 3 — PERMANOVA with adonis2: Testing Real Community Differences |
| Mar 03, 2026 | Day 2 — Constrained Ordination: RDA & dbRDA for Microbiome Community Analysis |
| Mar 02, 2026 | Day 1 — Why Normal Statistics Fail for Microbiome Data (And What We Use Instead) |
| Feb 24, 2026 | Day 5: Substrate Uptake & Utilization in Size-Fractionated Estuarine Microbiomes |
| Feb 20, 2026 | Metagenome Analysis - Graduate Course Materials |
| Feb 18, 2026 | 10-Day Metagenome Analysis Series - Complete Summary |
| Feb 16, 2026 | Day 10: Multi-Omics Integration - Metagenomics & Metatranscriptomics |
| Feb 14, 2026 | Day 9: Visualization & Publication - Making Data Tell Stories |
| Feb 13, 2026 | Day 8: Workflow Wrappers & Web Platforms - Streamlining Metagenome Analysis |
| Feb 12, 2026 | Day 7: Comparative Genomics & Statistical Analysis - Connecting Genomes to Environment |
| Feb 10, 2026 | Day 5: Genome Annotation - Understanding Metabolic Potential |
| Feb 09, 2026 | Day 4: Genome Dereplication & Taxonomic Classification - From MAGs to Species |
| Feb 06, 2026 | Day 3: Genome Binning - Recovering Individual Genomes (MAGs) from Metagenomes |
| Feb 04, 2026 | Day 2: Metagenome Assembly - Reconstructing Genomes from Short Reads |
| Feb 02, 2026 | Day 1: Quality Control, Contamination Removal, and Read-Based Taxonomic Analysis |
| Jan 30, 2026 | Genome-Resolved Metabolism: From Metabolic Potential to Co-Metabolism Networks |
| Jan 26, 2026 | Building Custom HUMAnN3 Databases with Struo2 and GTDB: A Realistic Guide from the Trenches |